Package index • codiv

All functions

check_inputs(): Checks inputs to codiv()

codiv(): Co-Diversification Scan Between Hosts and Symbionts

collapse_monophyletic(): Collapses monophyletic tips of a phylogenetic tree prior to codiv()

hommola(): Calculates the correlation between host and symbiont trees

hommola_wf(): Calculates the Hommola Correlation with permutations

host_symbiont_links(): Changes the host-to-symbiont data.frame() to wide-format

paco_wf(): Runs PACo